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SMARTPOP
Simulating Mating Alliances as a Reproductive Tactic for Populations
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SMARTPOP
Simulating Mating Alliances as a Reproductive Tactic for Populations
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This is the complete list of members for Population< T >, including all inherited members.
| analyse() | Population< T > | |
| burnin(int gen, double facMu) (defined in Population< T >) | Population< T > | |
| burnin(double diversityTreshold, int gen, double facMu) | Population< T > | |
| burnin(int gen, double facMu) (defined in Population< T >) | Population< T > | |
| burnin(int gen, double facMu) (defined in Population< T >) | Population< T > | |
| burnin(int gen, double facMu) (defined in Population< T >) | Population< T > | |
| burnin(double diversityTreshold, int genLimit, double facMu) (defined in Population< T >) | Population< T > | |
| burnin(double diversityTreshold, int genLimit, double facMu) (defined in Population< T >) | Population< T > | |
| burnin(double diversityTreshold, int genLimit, double facMu) (defined in Population< T >) | Population< T > | |
| diversity_A() const | Population< T > | |
| diversity_A() const (defined in Population< T >) | Population< T > | |
| diversity_A() const (defined in Population< T >) | Population< T > | |
| diversity_A() const (defined in Population< T >) | Population< T > | |
| diversity_mtdna() const | Population< T > | |
| diversity_mtdna() const (defined in Population< T >) | Population< T > | |
| diversity_mtdna() const (defined in Population< T >) | Population< T > | |
| diversity_mtdna() const (defined in Population< T >) | Population< T > | |
| diversity_X() const | Population< T > | |
| diversity_X() const (defined in Population< T >) | Population< T > | |
| diversity_X() const (defined in Population< T >) | Population< T > | |
| diversity_X() const (defined in Population< T >) | Population< T > | |
| diversity_Y() const | Population< T > | |
| diversity_Y() const (defined in Population< T >) | Population< T > | |
| diversity_Y() const (defined in Population< T >) | Population< T > | |
| diversity_Y() const (defined in Population< T >) | Population< T > | |
| evolve(int gen) | Population< T > | |
| evolve_gene(int gen, std::string filename) | Population< T > | |
| evolve_one() (defined in Population< T >) | Population< T > | |
| female | Population< T > | |
| get_crumbA() const (defined in Population< T >) | Population< T > | |
| get_crumbMt() const (defined in Population< T >) | Population< T > | |
| get_crumbX() const (defined in Population< T >) | Population< T > | |
| get_crumbY() const (defined in Population< T >) | Population< T > | |
| get_generation() const | Population< T > | |
| get_growthFactor() const (defined in Population< T >) | Population< T > | |
| get_inbreeding() const | Population< T > | |
| get_matingSystem() const | Population< T > | |
| get_muA1() const | Population< T > | |
| get_muA2() const | Population< T > | |
| get_muMt1() const | Population< T > | |
| get_muMt2() const | Population< T > | |
| get_muX1() const | Population< T > | |
| get_muX2() const | Population< T > | |
| get_muY1() const | Population< T > | |
| get_muY2() const | Population< T > | |
| get_nb_children() | Population< T > | |
| get_nb_mates() | Population< T > | |
| get_nbCellPerA() const (defined in Population< T >) | Population< T > | |
| get_nbCellPerX() const (defined in Population< T >) | Population< T > | |
| get_nbChromosomesA() const (defined in Population< T >) | Population< T > | |
| get_nbChromosomesX() const (defined in Population< T >) | Population< T > | |
| get_nbFemale() const | Population< T > | |
| get_nbHuman() const | Population< T > | |
| get_nbMale() const | Population< T > | |
| get_pop(int current) const | Population< T > | |
| get_popsizeDemo() const | Population< T > | |
| get_sizeMt() const | Population< T > | |
| get_sizePerA() const (defined in Population< T >) | Population< T > | |
| get_sizePerX() const (defined in Population< T >) | Population< T > | |
| get_sizeY() const (defined in Population< T >) | Population< T > | |
| male | Population< T > | |
| operator<< (defined in Population< T >) | Population< T > | friend |
| operator=(Population const &) | Population< T > | |
| output_arlequin(std::string const &filename) (defined in Population< T >) | Population< T > | |
| output_arlequin(std::string const &filename) (defined in Population< T >) | Population< T > | |
| output_arlequin(std::string const &filename) (defined in Population< T >) | Population< T > | |
| output_arlequin(std::string const &filename) (defined in Population< T >) | Population< T > | |
| output_diversity() | Population< T > | |
| output_genealogy(std::ofstream &fs) | Population< T > | |
| output_nb_child() | Population< T > | |
| output_nb_mates() | Population< T > | |
| output_pop_size() const | Population< T > | |
| pairwise_distance_mtdna() const | Population< T > | |
| pairwise_distance_mtdna() const (defined in Population< T >) | Population< T > | |
| pairwise_distance_mtdna() const (defined in Population< T >) | Population< T > | |
| pairwise_distance_mtdna() const (defined in Population< T >) | Population< T > | |
| polySites(int nuclear) const | Population< T > | |
| polySites(int nuclear) const (defined in Population< T >) | Population< T > | |
| polySites(int nuclear) const (defined in Population< T >) | Population< T > | |
| polySites(int nuclear) const (defined in Population< T >) | Population< T > | |
| polySites_mtdna() const | Population< T > | |
| polySites_mtdna() const (defined in Population< T >) | Population< T > | |
| polySites_mtdna() const (defined in Population< T >) | Population< T > | |
| polySites_mtdna() const (defined in Population< T >) | Population< T > | |
| Population() | Population< T > | inline |
| Population(int N, int mt, int xL, int xS, int y, int aL, int aS) | Population< T > | inlineexplicit |
| Population(Population const &a) | Population< T > | inline |
| Population(std::string const &filename) (defined in Population< T >) | Population< T > | explicit |
| Population(string const &filename) (defined in Population< T >) | Population< T > | |
| Population(string const &filename) (defined in Population< T >) | Population< T > | |
| Population(std::string const &filename) (defined in Population< T >) | Population< T > | |
| reset(int N) (defined in Population< T >) | Population< T > | |
| resize(int) | Population< T > | |
| set_growthFactor(double, double, double) | Population< T > | |
| set_growthFactor(std::vector< double >) | Population< T > | |
| set_inbreeding(int) | Population< T > | |
| set_mating_system(int) (defined in Population< T >) | Population< T > | |
| set_mu(double, double, double, double) | Population< T > | |
| set_mu(double, double, double, double, double, double, double, double) | Population< T > | |
| subsample(int sampleSize, int nbWomen) | Population< T > | |
| subsample_female() | Population< T > | |
| subsample_male() | Population< T > | |
| test(int) | Population< T > | |
| test(int i) (defined in Population< T >) | Population< T > | |
| test(int i) (defined in Population< T >) | Population< T > | |
| test(int i) (defined in Population< T >) | Population< T > | |
| write_fasta(std::string const &file_name) const | Population< T > | |
| write_fasta(std::string const &file_name) const (defined in Population< T >) | Population< T > | |
| write_fasta(string const &file_name) const (defined in Population< T >) | Population< T > | |
| write_fasta(std::string const &file_name) const (defined in Population< T >) | Population< T > | |
| write_nexus(std::string const &file_name) const | Population< T > | |
| write_nexus(std::string const &file_name) const (defined in Population< T >) | Population< T > | |
| write_nexus(string const &file_name) const (defined in Population< T >) | Population< T > | |
| write_nexus(std::string const &file_name) const (defined in Population< T >) | Population< T > | |
| write_smartFormat(std::string const &filename) const | Population< T > | |
| write_smartFormat(string const &filename) const (defined in Population< T >) | Population< T > | |
| write_smartFormat(string const &filename) const (defined in Population< T >) | Population< T > | |
| write_smartFormat(std::string const &filename) const (defined in Population< T >) | Population< T > | |
| write_txt_pop(std::string const &) const | Population< T > | |
| ~Population() | Population< T > | inline |
1.8.4
